Algorithmic Approaches for Genome Rearrangement: a Review  

Oleh:

Zimao Li ; Lusheng Wang ; Kaizhong Zhang

Jenis: Article from Journal - ilmiah internasional
Dalam koleksi: IEEE Transactions on Systems, Man, and Cybernetics: Part C Applications and Reviews vol. 36 no. 5 (Sep. 2006), page 636-648.
Topik: Genome Rearragement; Reversal; Syntenic Distance; Translocation; Transportation

Ketersediaan

Perpustakaan Pusat (Semanggi) Nomor Panggil: II69.2 Non-tandon: 1 (dapat dipinjam: 0) Tandon: tidak ada

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Isi artikel

Genome rearrangement is a new and important research area that studies the gene orders and the evolution of gene families. With the development of fast sequencing techniques, large-scale DNA molecules are investigated with respect to the relative order of genes in them. Contrary to the traditional alignment approach, genome rearrangements are based on comparison of gene orders. Recently, it became a topic capturing wide attention. In this paper, we cover many kinds of rearrangement events such as reversal, transposition, translocation, fussion, fission, and so on. Different types of distances between genomes or chromosomes are discussed. A variety of mathematic models are included.

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