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Selection of Conserved Epitopes from Hepatitis C Virus for Pan-Populational Stimulation of T-Cell Responses (from Clinical and Developmental Immunology 2013)
Bibliografi
Author:
Molero-Abraham, Magdalena
;
Lafuente, Esther M.
;
Flower, Darren R.
;
Reche, Pedro A.
Topik:
Hepatitis C
;
HCV
;
Seminar - Thesis lit
Bahasa:
(EN )
Penerbit:
Hindawi Publishing Corporation
Tempat Terbit:
New York
Tahun Terbit:
2013
Jenis:
Article - diterbitkan di jurnal ilmiah internasional
Fulltext:
601943.pdf
(2.66MB;
0 download
)
Abstract
The hepatitis C virus (HCV) is able to persist as a chronic infection, which can lead to cirrhosis and liver cancer.There is evidence
that clearance ofHCVis linked to strong responses byCD8 cytotoxic T lymphocytes (CTLs), suggesting that elicitingCTL responses
againstHCV through an epitope-based vaccine could prove an effective means of immunization.However,HCV genomic plasticity
as well as the polymorphisms of HLA I molecules restricting CD8 T-cell responses challenges the selection of epitopes for a widely
protective vaccine. Here, we devised an approach to overcome these limitations. From available databases, we first collected a set
of 245 HCV-specific CD8 T-cell epitopes, all known to be targeted in the course of a natural infection in humans. After a sequence
variability analysis, we next identified 17 highly invariant epitopes. Subsequently, we predicted the epitope HLA I binding profiles
that determine their potential presentation and recognition. Finally, using the relevant HLA I-genetic frequencies, we identified
various epitope subsets encompassing 6 conserved HCV-specific CTL epitopes each predicted to elicit an effective T-cell response
in any individual regardless of their HLA I background.We implemented this epitope selection approach for free public use at the
EPISOPT web server.
[seminar - thesis lit]
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